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Sat Mar 29 11:39:34 2025
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I have been trying to compile the sort program I have been working on in Edinburgh so I can work on it locally while at RIKEN. When compiling i receive the error shown in make.log (attached) saying that there are undefined reference in DataSource.cpp. Also attached is the make output when compiled in Edinburgh - basically just 'unused variable' warnings. This is exactly the same DataSource.cpp I am using in Edinburgh. I have carried out 'diff' on the DataSpyLib and DataXferLib directories which are included in the Makefile and no differences are present. I have also done this for DataSource directory and again, there are no differences between what I am running here and in Edinburgh. The only difference I have been able to observe so far is that in Edinburgh I am using g++ version: Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD /gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-4) (GCC) whereas on aidas1: Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux Thread model: posix gcc version 4.4.7 20120313 (Red Hat 4.4.7-17) (GCC) The libraries used are all found in LD_LIBRARY_PATH. On aidas1 this is: /MIDAS/Linux/lib64:/homes/npg/root/lib:/homes/npg/root/lib:/MIDAS/Linux/lib64:/homes/npg/root/lib and in Edinburgh: /Disk/ds-sopa-group/np/RIKEN/AIDAsort/MIDAS/Linux/lib64:/Disk/ds-sopa-group/np/thehubdata/thehub6/jlab_software/Linux_Scientific6-x86_64-gcc4.4.6/root/5.34.23/lib: *********UPDATE 03/10/16 ************* The methods are defined in /MIDAS/DataPackage/DataXferLib/V4_TCP/transfer.c This is in the expected INCLUDES path of: INCLUDES= -I/MIDAS/DataPackage/DataXferLib/V4_TCP -I/MIDAS/DataPackage/DataSpyLib
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